Publications
In Press
*Contributed equally
Mack KL*, Talbott HE*, Griffin MF*, Parker JB, Guardino, N. J., Spielman, A. F., ... & Fraser HB, Longaker MT. 2023. Allele-specific expression reveals genetic drivers of tissue regeneration in mice. Cell Stem Cell, 30(10), 1368-1381. Link.
Digest : Cis-regulatory arbitrators of regeneration
Ballinger MA*, Mack KL*, Durkin SM, Riddell EA, Nachman MW. 2023. Environmentally robust cis-regulatory changes underlie rapid climatic adaptation. PNAS. Link.
Mack KL, TA Square, B Zhao, CT Miller, HB Fraser. 2023. Evolution of spatial and temporal cis-regulatory divergence between marine and freshwater sticklebacks. Molecular Biology and Evolution 40(3):msad034. Link.
Bittner NKJ, Mack KL, Nachman MW. 2022. Convergent patterns of gene expression and protein evolution associated with adaptation to desert environments in rodents. Genome Biology and Evolution. Link.
Mack KL, Jaggard JB, Persons JL, et al. 2021. Repeated evolution of circadian clock dysregulation in cavefish populations. PLOS Genetics. 17: e1009642. doi:10.1371/journal.pgen.1009642. Link.
Bittner NKJ, Mack KL, and Nachman MW. Gene expression plasticity and desert adaptation in house mice. 2021. Evolution. Link.
Digest: On the contribution of phenotypic plasticity to adaptation in desert environments.
Suzuki TA, Phifer-Rixey M, Mack KL, Sheehan MJ, Lin TT, Bi K, Nachman MW. 2019. Host genetic determinants of the gut microbiota of wild mice. Molecular Ecology 28(13):3197-3207. Link.
Mack KL, Phifer-Rixey M, Harr B, Nachman MW. 2019. Gene expression networks across multiple tissues are associated with rates of molecular evolution in wild house mice. Genes, 10(3), 225. Link.
Mack KL, Ballinger MA, Phifer-Rixey M, Nachman MW. 2018. Gene regulation underlies environmental adaptation in house mice. Genome Res, gr-238998. Link.
Phifer-Rixey M, Bi K, Ferris KG, Sheehan MJ, Lin D, Mack KL, Keeble SM, Suzuki TA, Good JM, and Nachman MW. 2018. The genomic basis of environmental adaptation in house mice. PLOS genetics, 14:e1007672. Link.
Mack KL and Nachman MW. 2017. Gene Regulation and Speciation. Trends in Genetics, 33:68-80. Link.
Mack KL, Campbell P, Nachman MW. 2016. Gene regulation and speciation in house mice. Genome research, 26:451-461. Link
Holmes MW, Hammond TT, Wogan GO, Walsh RE, LaBarbera K, Wommack EA, Martins FM, Crawford JC, Mack KL, Bloch LM, Nachman MW. 2016. Natural history collections as windows on evolutionary processes. Molecular ecology, 25:864-881. Link.
Duveau F, Metzger BP, Gruber JD, Mack K, Sood N, Brooks TE, Wittkopp PJ. 2014. Mapping small effect mutations in Saccharomyces cerevisiae: impacts of experimental design and mutational properties. G3: Genes | Genomes | Genetics, g3-114. Link.
*Contributed equally
Mack KL*, Talbott HE*, Griffin MF*, Parker JB, Guardino, N. J., Spielman, A. F., ... & Fraser HB, Longaker MT. 2023. Allele-specific expression reveals genetic drivers of tissue regeneration in mice. Cell Stem Cell, 30(10), 1368-1381. Link.
Digest : Cis-regulatory arbitrators of regeneration
Ballinger MA*, Mack KL*, Durkin SM, Riddell EA, Nachman MW. 2023. Environmentally robust cis-regulatory changes underlie rapid climatic adaptation. PNAS. Link.
Mack KL, TA Square, B Zhao, CT Miller, HB Fraser. 2023. Evolution of spatial and temporal cis-regulatory divergence between marine and freshwater sticklebacks. Molecular Biology and Evolution 40(3):msad034. Link.
Bittner NKJ, Mack KL, Nachman MW. 2022. Convergent patterns of gene expression and protein evolution associated with adaptation to desert environments in rodents. Genome Biology and Evolution. Link.
Mack KL, Jaggard JB, Persons JL, et al. 2021. Repeated evolution of circadian clock dysregulation in cavefish populations. PLOS Genetics. 17: e1009642. doi:10.1371/journal.pgen.1009642. Link.
Bittner NKJ, Mack KL, and Nachman MW. Gene expression plasticity and desert adaptation in house mice. 2021. Evolution. Link.
Digest: On the contribution of phenotypic plasticity to adaptation in desert environments.
Suzuki TA, Phifer-Rixey M, Mack KL, Sheehan MJ, Lin TT, Bi K, Nachman MW. 2019. Host genetic determinants of the gut microbiota of wild mice. Molecular Ecology 28(13):3197-3207. Link.
Mack KL, Phifer-Rixey M, Harr B, Nachman MW. 2019. Gene expression networks across multiple tissues are associated with rates of molecular evolution in wild house mice. Genes, 10(3), 225. Link.
Mack KL, Ballinger MA, Phifer-Rixey M, Nachman MW. 2018. Gene regulation underlies environmental adaptation in house mice. Genome Res, gr-238998. Link.
Phifer-Rixey M, Bi K, Ferris KG, Sheehan MJ, Lin D, Mack KL, Keeble SM, Suzuki TA, Good JM, and Nachman MW. 2018. The genomic basis of environmental adaptation in house mice. PLOS genetics, 14:e1007672. Link.
Mack KL and Nachman MW. 2017. Gene Regulation and Speciation. Trends in Genetics, 33:68-80. Link.
Mack KL, Campbell P, Nachman MW. 2016. Gene regulation and speciation in house mice. Genome research, 26:451-461. Link
Holmes MW, Hammond TT, Wogan GO, Walsh RE, LaBarbera K, Wommack EA, Martins FM, Crawford JC, Mack KL, Bloch LM, Nachman MW. 2016. Natural history collections as windows on evolutionary processes. Molecular ecology, 25:864-881. Link.
Duveau F, Metzger BP, Gruber JD, Mack K, Sood N, Brooks TE, Wittkopp PJ. 2014. Mapping small effect mutations in Saccharomyces cerevisiae: impacts of experimental design and mutational properties. G3: Genes | Genomes | Genetics, g3-114. Link.